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pyrosequencing pyroseq  (Pyrosequencing Inc)

 
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    Pyrosequencing Inc pyrosequencing pyroseq
    A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , <t>FRMD6</t> and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) . The transcription start sites (TSSs), and the location of the PCR and sequencing primers are displayed. CpGs sites are represented by vertical bars. B Average percentage of CpGs methylation values within CDX2 and ZEB1 genes, and CpG methylation value of FRMD6 gene of each non-neoplastic colon (N) and each tumor (T) obtained by PyroSeq. The horizontal line represents the mean of both series (* p < 0.05, *** p < 0.001)
    Pyrosequencing Pyroseq, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/pyrosequencing pyroseq/product/Pyrosequencing Inc
    Average 90 stars, based on 1 article reviews
    pyrosequencing pyroseq - by Bioz Stars, 2026-04
    90/100 stars

    Images

    1) Product Images from "ZEB1 hypermethylation is associated with better prognosis in patients with colon cancer"

    Article Title: ZEB1 hypermethylation is associated with better prognosis in patients with colon cancer

    Journal: Clinical Epigenetics

    doi: 10.1186/s13148-023-01605-7

    A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , FRMD6 and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) . The transcription start sites (TSSs), and the location of the PCR and sequencing primers are displayed. CpGs sites are represented by vertical bars. B Average percentage of CpGs methylation values within CDX2 and ZEB1 genes, and CpG methylation value of FRMD6 gene of each non-neoplastic colon (N) and each tumor (T) obtained by PyroSeq. The horizontal line represents the mean of both series (* p < 0.05, *** p < 0.001)
    Figure Legend Snippet: A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , FRMD6 and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) . The transcription start sites (TSSs), and the location of the PCR and sequencing primers are displayed. CpGs sites are represented by vertical bars. B Average percentage of CpGs methylation values within CDX2 and ZEB1 genes, and CpG methylation value of FRMD6 gene of each non-neoplastic colon (N) and each tumor (T) obtained by PyroSeq. The horizontal line represents the mean of both series (* p < 0.05, *** p < 0.001)

    Techniques Used: Sequencing, Methylation, CpG Methylation Assay



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    The effects of LN exposure and sucrose consumption post-weaning on hippocampal gene expression of glucocorticoid receptor (A), <t>Neurod1</t> (B), and Akt3 (C) . Results are expressed as mean ± S.E.M; Two-way ANOVA followed by LSD, n = 7–8/group. Post-hoc analysis was performed when significant interaction between diet and LN was present. * p < 0.05 vs. control rats consuming the same diet (LN effect). † p < 0.05 vs. rats consuming chow (diet effect).
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    Image Search Results


    A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , FRMD6 and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) . The transcription start sites (TSSs), and the location of the PCR and sequencing primers are displayed. CpGs sites are represented by vertical bars. B Average percentage of CpGs methylation values within CDX2 and ZEB1 genes, and CpG methylation value of FRMD6 gene of each non-neoplastic colon (N) and each tumor (T) obtained by PyroSeq. The horizontal line represents the mean of both series (* p < 0.05, *** p < 0.001)

    Journal: Clinical Epigenetics

    Article Title: ZEB1 hypermethylation is associated with better prognosis in patients with colon cancer

    doi: 10.1186/s13148-023-01605-7

    Figure Lengend Snippet: A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , FRMD6 and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) . The transcription start sites (TSSs), and the location of the PCR and sequencing primers are displayed. CpGs sites are represented by vertical bars. B Average percentage of CpGs methylation values within CDX2 and ZEB1 genes, and CpG methylation value of FRMD6 gene of each non-neoplastic colon (N) and each tumor (T) obtained by PyroSeq. The horizontal line represents the mean of both series (* p < 0.05, *** p < 0.001)

    Article Snippet: Fig. 1 A Ideograms showing the location of the gene regions analyzed by pyrosequencing (PyroSeq) for CDX2 , FRMD6 and ZEB1 genes, obtained from UCSC Genome Browser (Human GRCh37/hg19) .

    Techniques: Sequencing, Methylation, CpG Methylation Assay

    Some characteristics of hitherto sequenced Campylobacter phages.

    Journal: Methods and Protocols

    Article Title: Campylobacter Phage Isolation and Characterization: What We Have Learned So Far

    doi: 10.3390/mps2010018

    Figure Lengend Snippet: Some characteristics of hitherto sequenced Campylobacter phages.

    Article Snippet: Sequencing/ platform , Shotgun seq. DNA libraries , 454 FLX pyroseq. and PCR/ Sanger , 454 FLX pyroseq., and PCR/ Sanger , 454 FLX pyroseq. , 454 FLX pyroseq. , Fidelity System , 454 FLX pyroseq. , n.a. , 454 FLX pyroseq. , 454 FLX pyroseq. , 454 FLX pyroseq. , Illumina.

    Techniques: Isolation, Sequencing

    The effects of LN exposure and sucrose consumption post-weaning on hippocampal gene expression of glucocorticoid receptor (A), Neurod1 (B), and Akt3 (C) . Results are expressed as mean ± S.E.M; Two-way ANOVA followed by LSD, n = 7–8/group. Post-hoc analysis was performed when significant interaction between diet and LN was present. * p < 0.05 vs. control rats consuming the same diet (LN effect). † p < 0.05 vs. rats consuming chow (diet effect).

    Journal: Frontiers in Molecular Neuroscience

    Article Title: Sugar Consumption Produces Effects Similar to Early Life Stress Exposure on Hippocampal Markers of Neurogenesis and Stress Response

    doi: 10.3389/fnmol.2015.00086

    Figure Lengend Snippet: The effects of LN exposure and sucrose consumption post-weaning on hippocampal gene expression of glucocorticoid receptor (A), Neurod1 (B), and Akt3 (C) . Results are expressed as mean ± S.E.M; Two-way ANOVA followed by LSD, n = 7–8/group. Post-hoc analysis was performed when significant interaction between diet and LN was present. * p < 0.05 vs. control rats consuming the same diet (LN effect). † p < 0.05 vs. rats consuming chow (diet effect).

    Article Snippet: The pyrosequencing primer was Neurod1 pyroseq; TTAGTTGTTGAGGTTGAG and the pyrosequencing sequence to analyse was YGYGGGYGGGGTYGTGAGCT.

    Techniques: Gene Expression, Control

    Percentage of DNA methylation at 4 CpG sites in the (A) GR and (B) Neurod1 promoter regions across Con, LN, Con-Sucrose, and LN-Sucrose groups . Results are expressed as mean ± S.E.M; Two-way ANOVA followed by LSD, n = 8–13/group. No significant interaction was observed between LN exposure and sucrose diet.

    Journal: Frontiers in Molecular Neuroscience

    Article Title: Sugar Consumption Produces Effects Similar to Early Life Stress Exposure on Hippocampal Markers of Neurogenesis and Stress Response

    doi: 10.3389/fnmol.2015.00086

    Figure Lengend Snippet: Percentage of DNA methylation at 4 CpG sites in the (A) GR and (B) Neurod1 promoter regions across Con, LN, Con-Sucrose, and LN-Sucrose groups . Results are expressed as mean ± S.E.M; Two-way ANOVA followed by LSD, n = 8–13/group. No significant interaction was observed between LN exposure and sucrose diet.

    Article Snippet: The pyrosequencing primer was Neurod1 pyroseq; TTAGTTGTTGAGGTTGAG and the pyrosequencing sequence to analyse was YGYGGGYGGGGTYGTGAGCT.

    Techniques: DNA Methylation Assay